Issues

• New ISA-L release

  IntelLabs/GKL#219 · Filter by author lattwood opened on Jun 8, 2026

• Segfault reported by GATK user

  IntelLabs/GKL#213 · Filter by author lbergelson opened on Sep 30, 2024

• cmake install statements for all installed libraries are wrong

  IntelLabs/GKL#211 · Filter by author yurivict opened on Aug 4, 2024

• SmithWaterman result inconsistency by optimization level

  IntelLabs/GKL#202 · Filter by author wook-choi opened on Mar 12, 2024

• GATK AVX accelerated pairHMM Segfault issue with Long reads - Consistently around the same region

  IntelLabs/GKL#200 · Filter by author gokalpcelik opened on Sep 9, 2023

• the way of docker or apptainer install

  IntelLabs/GKL#199 · Filter by author user-tq opened on Aug 31, 2023

• Deflater.needsInput() Always returns true

  IntelLabs/GKL#191 · Filter by author lechiefe opened on Jun 27, 2023
  4

• Segfault in the native PairHMM on certain CPU / JVM combinations

  IntelLabs/GKL#187 · Filter by author droazen opened on May 26, 2023

• Does GKL support arm architecture?

  IntelLabs/GKL#173 · Filter by author codeseedling opened on Aug 6, 2022
  3

• Help, where is the function impl of 'compute_fp_avx512s' ?

  IntelLabs/GKL#172 · Filter by author LightSun opened on Apr 1, 2022

• Potential memory leak observed in unusual HaplotypeCaller behavior

  IntelLabs/GKL#171 · Filter by author jamesemery opened on Feb 25, 2022
  1

• smithWatermanBackTrack is being shared between AVX2 and AVX-512

  IntelLabs/GKL#169 · Filter by author philipc opened on Dec 27, 2021
  2

• PairHMM stripe initialization of M_t_1_y is wrong

  IntelLabs/GKL#163 · Filter by author philipc opened on Dec 12, 2021
  1

• Zlib performance comparison for genomic data

  enhancement
  IntelLabs/GKL#106 · Filter by author lbergelson opened on Apr 28, 2020

• SmithWaterman returns incorrect alignments.

  bug
  IntelLabs/GKL#104 · Filter by author d-cameron opened on Apr 27, 2020
  4