This series of notebooks and scripts is for an introduction to basics of coding.
- Week 1: Python Basics
- Week 2: Bash
- Week 3: DNAnexus App Building
- Week 4: Intro to Django
- Week 5: Argparse, list comprehensions and lambda functions
- Week 6: Classes
- Week 7: Virtual environments
- Biopython: A basic introduction
- Coding tasks:
- VEP comparison
- hap.py output plotting
- TSO500 CNV counting
- Unit Testing: Principles, Python and TDD