Issues

• Gate RO-Crate fixtures with fairagro-middleware-arc-validation (per-RDI system_local)

  cost:mediumseverity:low
  Feature

  fairagro/m4.2_sql_to_arc#278 · Filter by author Zalfsten opened on Oct 8, 2026

• Wire Feature-PR Helm lint after product chart + Devinfra reusable (follow-up to #271 / devinfra#288)

  cost:mediumseverity:low
  Task

  fairagro/m4.2_sql_to_arc#272 · Filter by author Zalfsten opened on Oct 5, 2026

• Add product Helm chart (from m4.2_infrastructure sql-to-arc chart)

  cost:mediumseverity:low
  Feature

  fairagro/m4.2_sql_to_arc#271 · Filter by author Zalfsten opened on Oct 5, 2026
  1

• Adopt post-merge Main Docker Check for Code Scanning SARIF on main

  cost:cheapseverity:low
  Task

  fairagro/m4.2_sql_to_arc#262 · Filter by author Zalfsten opened on Sep 30, 2026

• Adopt API-light package; replace demo_api_main.py

  cost:mediumseverity:low
  Task

  fairagro/m4.2_sql_to_arc#163 · Filter by author Zalfsten opened on Sep 15, 2026
  1

• Dependency Dashboard

  fairagro/m4.2_sql_to_arc#109 · Filter by author Zalfsten opened on Sep 14, 2026

• Bump detect-changes Action majors to match API Wave C caller

  cost:cheappracticality:highseverity:low
  Task

  fairagro/m4.2_sql_to_arc#104 · Filter by author Zalfsten opened on Sep 10, 2026

• Add DataHUB-equivalent ARC export validation for SQL-to-ARC outputs

  test
  Feature

  fairagro/m4.2_sql_to_arc#86 · Filter by author Zalfsten opened on Aug 20, 2026

• Database Views: Edaphobase-scale assays vs. AnnotationTables (ISA/ARC provenance)

  Database Viewsrdi:edaphobase
  Discussion

  fairagro/m4.2_sql_to_arc#79 · Filter by author Zalfsten opened on Aug 3, 2026

• Database Views: Decision needed: n:m view links — JSON string vs. repeated rows

  Database Viewsrdi:edaphobase
  Discussion

  fairagro/m4.2_sql_to_arc#78 · Filter by author Zalfsten opened on Aug 3, 2026

• Database Views: Conflicting duplicate vStudy rows: differing title / submission_date for the same study identifier

  Database Viewsrdi:edaphobase
  Bug

  fairagro/m4.2_sql_to_arc#77 · Filter by author Zalfsten opened on Aug 3, 2026

• Database Views: duplicate assays with conflicting technology_type_term field

  Database Viewsrdi:edaphobase
  Bug

  fairagro/m4.2_sql_to_arc#76 · Filter by author Zalfsten opened on Aug 3, 2026
  1

• Implement OntologySourceReference usage

  fairagro/m4.2_sql_to_arc#36 · Filter by author Zalfsten opened on Apr 13, 2026

• Optimize ARC upload by passing raw JSON string to ApiClient

  fairagro/m4.2_sql_to_arc#27 · Filter by author Zalfsten opened on Apr 2, 2026

• Discussion: SQL-to-ARC view definitions

  Task

  fairagro/m4.2_sql_to_arc#8 · Filter by author Zalfsten opened on Jan 8, 2026

• Questions arising form the SQL-to-ARC view definitions

  Task

  fairagro/m4.2_sql_to_arc#9 · Filter by author Zalfsten opened on Jan 7, 2026