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@lcrawlab

Crawford Lab

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  1. BANNs BANNs Public

    Code and simulations using biologically annotated neural networks

    HTML 23 6

  2. recall recall Public

    Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing

    R 21 2

  3. mvMAPIT mvMAPIT Public

    The multivariate MArginal ePIstasis Test

    R 14 2

  4. i-LDSC i-LDSC Public

    Code and simulations using interaction-LD score regression

    Python 13 1

  5. SINATRA SINATRA Public

    A statistical framework for feature selection and association mapping with 3D shapes

    R 8 4

  6. SINATRA-Pro SINATRA-Pro Public

    Topological data analytic approach for discovering biophysical signatures in protein dynamics

    Python 4 2

Repositories

Showing 10 of 19 repositories
  • ashapesampler Public

    R package for generating synthetic shapes and images using the α-shape sampler

    lcrawlab/ashapesampler's past year of commit activity
    R 0 GPL-3.0 1 0 0 Updated Oct 3, 2026
  • sme Public

    A fast and scalable method to detect epistasis in complex traits from biobank-scale studies

    lcrawlab/sme's past year of commit activity
    C++ 4 1 0 1 Updated Sep 16, 2026
  • cancer-drug-synergy-prediction Public

    Github repo for cancer drug synergy prediction work

    lcrawlab/cancer-drug-synergy-prediction's past year of commit activity
    Shell 2 MIT 0 0 0 Updated Aug 25, 2026
  • mvMAPIT Public

    The multivariate MArginal ePIstasis Test

    lcrawlab/mvMAPIT's past year of commit activity
    R 14 GPL-3.0 2 3 0 Updated Feb 20, 2026
  • recall Public

    Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing

    lcrawlab/recall's past year of commit activity
    R 21 2 4 0 Updated Nov 18, 2025
  • lcrawlab/recallreproducibility's past year of commit activity
    R 0 0 0 0 Updated Sep 12, 2025
  • callback Public archive

    Calibrated clustering via knockoffs for single-cell genomics

    lcrawlab/callback's past year of commit activity
    R 11 0 0 0 Updated Feb 13, 2025
  • Geneformer Public
    lcrawlab/Geneformer's past year of commit activity
    Python 1 1 0 0 Updated Dec 14, 2024
  • i-LDSC Public

    Code and simulations using interaction-LD score regression

    lcrawlab/i-LDSC's past year of commit activity
    Python 13 GPL-3.0 1 2 0 Updated Jul 2, 2024
  • multio-viz Public

    A platform for the interactive assessment of gene regulatory networks

    lcrawlab/multio-viz's past year of commit activity
    R 3 GPL-3.0 0 0 0 Updated May 10, 2024

People

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